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학과소개 About Department

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구성원

김윤곤

  • 교수실 : 형남공학관 905호
  • TEL : 02-828-7099
  • FAX : 02-812-5378
  • E-Mail : ygkim@ssu.ac.kr
  • 직위 : 교수

학사/충남대학교 공과대학 화학공학과 (2002)
석사/서울대학교 공과대학 생물화학공학 전공 (2004)
박사/서울대학교 공과대학 생물화학공학 전공 (2008)
전공분야/생물화학공학, 생체분자공학
홈페이지/세포 및 생체분자공학 연구실

연구내용

질병 진단 및 모니터링을 위한 바이오마커 스크리닝 기술 개발

바이오의약품 제조공정 및 품질 평가 기술 개발

체외 장내 환경 모사 시스템 개발

Host-microbe interaction 응용기술 개발

경력

2018.2 ~ 2019.1 University of Washington, 방문연구교수

2009.9 ~ 2012.2 Harvard University, 박사후 연구원

2008.9 ~ 2009.8 Harvard Medical School, 박사후 연구원

2004.8 ~ 2009.4 University of Oxford, 영국외무성 장학금 교환학생 

논문

2022

141. Sol Lee Park, Jang Yeon Cho, Su Hyun Kim, Hong-Ju Lee, Sang Hyun Kim, Min Ju Suh, Sion Ham, Shashi Kant Bhatia, Ranjit Gurav, See-Hyoung Park, Kyungmoon Park, Yun-Gon Kim, Yung-Hun Yang "Novel Polyhydroxybutyrate-Degrading Activity of the Microbulbifer Genus as Confirmed by Microbulbifer sp. SOL03 from the Marine Environment" Journal of Microbiolog and Biotechnology 2022, 32(1), 1-10

142. Ji-Hyeon Park, Won-Suk Song, Jeongchan Lee, Sung-Hyun Jo, Jae-Seung Lee, Hyo-Jin Jeon, Ji-Eun Kwon, Ye-Rim Kim, Ji-Hyun Baek, Min-Gyu Kim, Yung-Hun Yang, Byung-Gee Kim, Yun-Gon Kim "An Integrative Multiomics Approach to Characterize Prebiotic Inulin Effects on Faecalibacterium prausnitzii" Frontiers in Bioengineering and Biotechnology, 2022, 154

143. Won-Suk Song, Jae-Seung Lee, Jun Woo Lim, JiEung-Kim, Sung-Hyun Jo, Ji-Eun Kwon, Ji-Hyeon Park, Sang Hyoun Choi, Dongchan Jang, Il Won Kim, Jae Hyun Jeong, Yun-Gon Kim "Multiomics characterization of dose- and time-dependent effects of ionizing radiation on human skin keratinocytes" Korean Journal of Chemical Engineering, 2022, 39, 24552464

144. Suran Kim, Sungjin Min, Yi Sun Choi, Sung-Hyun Jo, Jae Hun Jung, Kyusun Han, Jin Kim, Soohwan An, Yong Woo Ji, Yun-Gon Kim, Seung-Woo Cho "Tissue extracellular matrix hydrogels as alternatives to Matrigel for culturing gastrointestinal organoids" Nature Communications, 2022, 13, 1692

145. Harshad Lade, Sung Hee Chung, Yeonhee Lee, Bajarang Vasant Kumbhar, Hwang-Soo Joo, Yun-Gon Kim, Yung-Hun Yang, and Jae-Seok Kim "Thymol Reduces agr-Mediated Virulence Factor Phenol-Soluble Modulin Production in Staphylococcus aureus" BioMed Research International, 2022

146. Hong-Ju Lee, Byungchan Kim, Suhyun Kim, Do-Hyun Cho, Heeju Jung, Wooseong Kim, Yun-Gon Kim, Jae-Seok Kim, Hwang-Soo Joo, Sang-Ho Lee, and Yung-Hun Yang "Leucyl-tRNA Synthetase Inhibitor, D-Norvaline, in Combination with Oxacillin, Is Effective against Methicillin-Resistant Staphylococcus aureus" Antibiotics, 2022, 11(5), 683

147. Shashi Kant Bhatia, Ranjit Gurav, Byungchan Kim, Suhyun Kim, Do-Hyun Cho, Heeju Jung, Yun-Gon Kim, Jae-Seok Kim, Yung-Hun Yang "Coproduction of exopolysaccharide and polyhydroxyalkanoates from Sphingobium yanoikuyae BBL01 using biochar pretreated plant biomass hydrolysate" Bioresource Technology, 2022, 127753

148. Ji-Eun Kwon, Sung-Hyun Jo, Won-Suk Song, Jae-Seung Lee, Hyo-Jin Jeon, Ji-Hyeon Park, Ye-Rim Kim, Ji-Hyun Baek, Min-Gyu Kim, Seo-Young Kwon, Jae-Seok Kim, Yung-Hun Yang and Yun-Gon Kim "Investigation of metabolic crosstalk between host and pathogenic Clostridioides difficile via multiomics approaches" Frontiers in Bioengineering and Biotechnology, 2022, 971739

149. Yoonhee Jin, Hyeok Kim, Sungjin Min, Yi Sun Choi, Seung Ju Seo, Eunseon Jeong, Su Kyeom Kim, Hyang-Ae Lee, Sung-Hyun Jo, Jae-Hyun Park, Bong-Woo Park, Woo-Sup Sim, Jin-Ju Kim, Kiwon Ban, Yun-Gon Kim, Hun-Jun Park and Seung-Woo Cho "Three-dimensional heart extracellular matrix enhances chemically induced direct cardiac reprogramming" Science Advances, 2022, in press


2021

140. Jae-Seung Lee, Won-Suk Song, Jun Woo Lim, Tae-Rim Choi, Sung-Hyun Jo, Hyo-Jin Jeon, Ji-Eun Kwon, Ji-Hyeon Park, Ye-Rim Kim, Yung-Hun Yang, Jae Hyun Jeong, Yun-Gon Kim "An integrative multiomics approach to characterize anti-adipogenic and anti-lipogenic effects of Akkermansia muciniphila in adipocytes", Biotechnology Journal, 2021, 2100397

139. Suran Kim, Yi Sun Choi, Jung Seung Lee, Sung-Hyun Jo, Yun-Gon Kim, Seung-Woo Cho "Intestinal extracellular matrix hydrogels to generate intestinal organoids for translational applications" Journal of Industrial and Engineering Chemistry, 2021, 1-29

138. Hye Soo Lee, Hong-Ju Lee, Sang Hyun Kim, Jang Yeon Cho, Min Ju Suh, Sion Ham, Shashi Kant Bhatia, Ranjit Gurav, Yun-Gon Kim, Eun Yeol Lee, Yung-Hun Yang "Novel phasins from the Arctic Pseudomonas sp. B14-6 enhance the production of polyhydroxybutyrate and increase inhibitor tolerance" International Journal of Biological Macromolecules, 2021, 190, 722-729

137. Hye Soo Lee, Hun-Suk Song, Hong-Ju Lee, Sang Hyun Kim, Min Ju Suh, Jang Yeon Cho, Sion Ham, Yun-Gon Kim, Hwang-Soo Joo, Wooseong Kim, Sang Ho Lee, Dongwon Yoo, Shashi Kant Bhatia, and Yung-Hun Yang "Comparative Study of the Difference in Behavior of the Accessory Gene Regulator (Agr) in USA300 and USA400 Community-Associated Methicillin-Resistant Staphylococcus aureus (CA-MRSA)" Journal of Microbiology and Biotechnology, 2021, 31(8):1060-1068

136. Shashi Kant Bhatia, Ranjit Gurav, Yong-Keun Choi, Tae-Rim Choi, Hyun-joong Kim, Hun-Suk Song, Sun Mi Lee, Sol Lee Park, Hye Soo Lee, Yun-Gon Kim, Jungoh Ahn, Yung-Hun Yang "Bioprospecting of exopolysaccharide from marine Sphingobium yanoikuyae BBL01: Production, characterization, and metal chelation activity" Bioresource Technology, 2021, 124674

135. Ann-Na Cho, Yoonhee Jin, Yeonjoo An, Jin Kim, Yi Sun Choi, Jung Seung Lee, Junghoon Kim, Won-Young Choi, Dong-Jun Koo, Weonjin Yu, Gyeong-Eon Chang, Dong-Yoon Kim, Sung-Hyun Jo, Jihun Kim, Sung-Yon Kim, Yun-Gon Kim, Ju Young Kim, Nakwon Choi, Eunji Cheong, Young-Joon Kim, Hyunsoo Je, Hoon-Chul Kang, and Seung-Woo Cho "Microfluidic device with brain extracellular matrix promotes structural and functional maturation of human brain organoids" Nature Communications, 2021, 12:4730

134. Hee-Jin Jeong, Eun-Jung Kim, Joo-Kyung Kim, Yun-Gon Kim, Chang-Soo Lee, Byoung Joon Ko, and Byung-Gee Kim "Expression of soluble recombinant human matrix metallopreoteinase 9 and generation of its monoclonal antibody" Protein Expression and Purification, 2021, 105931

133. Afrouzossadat HosseiniAbari, HamedAmini Rourani, Seyed MahdiGhasemi, Hyun Kim and Yun-Gon Kim "Investigation of antioxidant and anticancer activities of unsaturated oligo-galacturonic acids produced by pectinase of Streptomyces hydrogenans YAM1" Scientific Reports, 2021, 11:8491

132. Eun-Jung Kim, Gyu-Min Im, Chang-Soo Lee, Yun-Gon Kim, Byoung Joon Ko, Hee-Jin Jeong, and Byung-Gee Kim "Generation of Monoclonal Antibodies for Sensitive Detection of Pro-Inflammatory Protein S100A9" Applied Sciences, 2021, 11, 10, 4659

131. Hye Soo Lee, Sun Mi Lee, Sol Lee Park, Tae-Rim Choi, Hun-Suk Song, Hyun-Joong Kim, Shashi Kant Bhatia, Ranjit Gurav, Yun-Gon Kim, June-Hyung Kim, Kwon-Young Choi and Yung-Hun Yang "Tung oil-based production of high 3-hydroxyhexanoate-containing terpolymer poly(3-hydroxybutyrate-co-3-hydroxyvalerate-co-3-hydroxyhexanoate) using engineered Ralstonia eutropha" Polymers, 2021, 13(7), 1084

130. Yoonhee Jin, Eun Je Jeon, Sohyeon Jeong, Sungjin Min, Yi Sun Choi, So Hyun Kim, Jung Seung Lee, Jisoo Shin, Ji Hea Yu, Da-Hee Ahn, Yun-Gon Kim, Hee Seok Yang, Taek Jin Kang, Sung-Rae Cho, Nakwon Choi, and Seung-Woo Cho "Reconstruction of muscle fascicle-like tissues by anisotropic 3D patterning" Advanced Functional Materials, 2021, 2006227

129. Yi Sun Choi, Eunseon Jeong, Jung Seung Lee, Su Kyeom Kim, Sung-Hyun Jo, Yun-Gon Kim, Hak-Joon Sung, Seung-Woo Cho, and Yoonhee Jin "Immunomodulatory Scaffolds Derived from Lymph Node Extracellular Matrices" ACS applied materials & interfaces, 2021, 13, 12, 14037-14049

128. Won-Suk Song, Sung Gyu Shin, Sung-Hyun Jo, Jae-Seung Lee, Hyo-Jin Jeon, Ji-Eun Kwon, Ji-Hyeon Park, Sungwoo Cho, Jae Hyun Jeong, Byung-Gee Kim and Yun-Gon Kim "Development of an in vitro coculture device for the investigation of host-microbe interactions via integrative multiomics approaches" Biotechnology and Bioengineering, 2021, 4, 118(4), 1612-1623

127. Jeonchan Lee, Joonwon Kim, Ji Eun Song, Won-Suk Song, Eun-Jung Kim, Yun-Gon Kim, Hee-Jin Jeong, Hye Rim Kim, Kwon-Young Choi and Byung-Gee Kim "Production of Tyrian purple indigoid dye from tryptophan in Escherichia coli" Nature Chemical Biology, 2021, 17.1, 104-112


2020

126. Hun-Suk Song, Tae-Rim Choi, Shashi Kant Bhatia, Sun Mi Lee, Sol Lee Park, Hye Soo Lee, Yun-Gon Kim, Jae-Seok Kim, Woo-seong Kim and Yung-Hun Yang "Combination Therapy Using Low-Concentration Oxacillin with Palmitic Acid and Span85 to Control Clinical Methicillin-Resistant Staphylococcus aureus" Antibiotics, 2020, 9(10), 682

125. Sung-Hyun Jo, Won-Suk Song, Han-Gyu Park, Jae-Seung Lee, Hyo-Jin Jeon, Yeon-Hee Lee, Wooseong Kim, Hwang-Soo Joo, Yung-Hun Yang, Jae-Seok Kim and Yun-Gon Kim "Multi-omics based characterization of antibiotic response in clinical isogenic isolates of methicillin-susceptible/-resistant Staphylococcus aureus" RSC advances, 2020, 10, 27864-27873

124. Ye-Lim Park, Tae-Rim Choi, Yeong-Hoon Han, Hun-Suk Song, Jun-Young Park, Shashi Kant Bhatia, Ranjit Gurav, Kwon-Young Choi, Yun-Gon Kim and Yung-Hun Yang "Effects of osmolytes on salt resistance of Halomonas socia CKY01 and identification of osmolytes-related genes by genome sequencing" Journal of Biotechnology, 2020, 10, 322:21-28

123. Won-Suk Song, Seong-Min Kim, Sung-Hyun Jo, Jae-Seung Lee, Hyo-Jin Jeon, Byoung Joon Ko, Kwon-Young Choi, Yung-Hun Yang and Yun-Gon Kim "Multi-omics characterization of the osmotic stress resistance and protease activities of the halophilic bacterium Pseudoalteromonas phenolica in response to salt stress" RSC Advances, 2020, 10, 23792-23800

122. Hun-Suk Song, Tae-Rim Choi, Yeong-Hoon Han, Ye-Lim Park, Jun Young Park, Soo-Yeon Yang, Shashi Kant Bhatia, Ranjit Gurav, Yun-Gon Kim, Jae-Seok Kim, Hwang-Soo Joo and Yung-Hun Yang "Increased resistance of a methicillin-resistant Staphylococcus aureus agr mutant with modified control in fatty acid metabolism" AMB express, 2020, 10(1), 1-10

121. Deok-ryeong Kim, Yeonhee Lee, Hyeon-kyeong Kim, Wooseong Kim, Yun-Gon Kim, Yung-Hun Yang, Jae-Seok Kim and Hwang-Soo Joo "Phenol-Soluble Modulin-Mediated Aggregation of Community-Associated Methicillin-Resistant Staphylococcus Aureus in Human Cerebrospinal Fluid" Cells, 2020, 9(3):788

120. Ye-Lim Park, Shashi Kant Bhatia, Ranjit Gurava, Tae-Rim Choi, Hyun Joong Kim, Hun-Suk Song, Jun-Young Park, Yeong-Hoon Han, Sun-Mi Lee, Sol-Lee Park, Hye-Soo Lee, Yun-Gon Kim and Yung-Hun Yang "Fructose based hyper production of poly-3-hydroxybutyrate from Halomonas sp. YLGW01 and impact of carbon sources on bacteria morphologies" International Journal of Biological Macromolecules, 2020, 154:929-936

119. Seong-Min Kim, Han-Gyu Park, Won-Suk Song, Sung-Hyun Jo, Yung-Hun Yang and Yun-Gon Kim "LCMS/MS based observation of Clostridium difficile inhibition by Lactobacillus rhamnosus GG" Journal of Industrial and Engineering Chemistry, 2020, 85:161-169

118. Won-Suk Song, Han-Gyu Park, Seong-Min Kim, Sung-Hyun Jo, Byung-Gee Kim, Ashleigh B. Theberge and Yun-Gon Kim "Chemical derivatization-based LC-MS/MS method for quantitaion of gut microbial short-chain fatty acids" Journal of Industrial and Engineering Chemistry, 2020, 83:297-302

117. Shashi Kant Bhatia, Sujit Sadashiv Jagtap, Ashwini Ashok Bedekar, Ravi Kant Bhatia, Anil Kumar Patel, Deepak Pant, J.Rajesh Banu, Christopher V.Rao, Yun-Gon Kim and Yung-Hun Yang "Recent developments in pretreatment technologies on lignocellulosic biomass: Effect of key parameters, technological improvements, and challenges" Bioresource Technology, 2020, 300:122724

116. Da-Hee Ahn, Hee-Jin Kim, Seong-Min Kim, Sung-Hyun Jo, Jae-Hyun Jeong and Yun-Gon Kim "MALDI-MS-Based Quantitative Analysis of Bioactive Forms of Vitamin D in Biological samples" Korean Chemical Engineering Research, 2020, 58(1):106-112


2019

115. Ranjit Gurava, Shashi Kant Bhatia, Tae-Rim Choi, Hye-Rim Jung, Soo-Yeon Yang, Hun-Suk Song, Ye-Lim Park, Yeong-Hoon Han, Jun-Young Park, Yun-Gon Kim, Kwon-Young Choi, Yung-Hun Yang “Chitin biomass powered microbial fuel cell for electricity production using halophilic Bacillus circulans BBL03 isolated from sea salt harvesting area” Bioelectrochemistry, 2019, 130:107329

114. Hye-Rim Jung, Jong-Min Jeon, Da-Hye Yi, Hun-Suk Song, Soo-Yeon Yang, Tae-Rim Choi, Shashi Kant Bhatia, Jeong-Jun Yoon, Yun-Gon Kim, Christopher J. Brigham, Yung-Hun Yang “Poly(3-hydroxybutyrate-co-3-hydroxyvalerate-co-3-hydroxyhexanoate) terpolymer production from volatile fatty acids using engineered Ralstonia eutropha” International Journal of Biological Macromolecules, 2019, 138:370-378

113. Shashi Kant Bhatia, Ranjit Gurav, Tae-Rim Choi, Hye-Rim Jung, Soo-Yeon Yang, Hun-Suk Song, Yun-Gon Kim, Jeong-Jun Yoon, Yung-Hun Yang "Effect of synthetic and food waste-derived volatile fatty acids on lipid accumulation in Rhodococcus sp. YHY01 and the properties of produced biodisel" Energy Conversion and Management, 2019, 192:385-395

112. Sung-Hyun Jo, Han-Gyu Park, Won-Suk Song, Seong-Min Kim, Eun-Jung Kim, Yung-Hun Yang, Jae-Seok Kim, Byung-Gee Kim and Yun-Gon Kim “Structural characterization of phosphoethanolamine-modified lipid A from probiotic Escherichia coli strain Nissle 1917” RSC Advances, 2019, 9:19762-19771

111. Da-Hee Ahn, Han-Gyu Park, Won-Suk Song, Seong-Min Kim, Sung-Hyun Jo, Yung-Hun Yang, and Yun-Gon Kim “A MALDI-MS-based Glucan Hydrolase Assay Method for Whole-cell Biocatalysis” Microbiology and Biotechnology Letters, 2019, 47:69-77

110. Han-Gyu Park, Kyoung-Soon Jang, Hae-Min Park, Won-Suk Song, Yoon-Yi Jeong, Da-Hee Ahn, Seong-Min Kim, Yung-Hun Yang and Yun-Gon Kim “MALDI-TOF MS-based total serum protein fingerprinting for liver cancer diagnosis” Analyst, 2019, 144:2231-2238

109. Myung-Seop Shin, Yun-Gon Kim, Yoo Jin Shin, Byoung Joon Ko, Sungtae Kim, Hyun-Duck Kim “Deep sequencing salivary proteins for periodontitis using proteomics” Clinical Oral Investigations, 2019, 23:3571-3580


2018

108. Cheol-Hwan Hwang, Hae-Min Park, Han-Gyu Park, Da-Hee Ahn, Seong-Min Kim, Byoung Joon Ko, Young Hwan Kim, Yung-Hun Yang, and Yun-Gon Kim “Quantitative characterization of intact sialylated O-glycans with MALDI-MS for protein biotherapeutics” Korean Journal of Chemical Engineering, 2018, 35:1462-1467

107. Shashi Kant Bhatia, Jeong-Jun Yoon, Hyun-Joong Kim, Ju Won Hong, Yoon Gi Hong, Hun-Seok Song, Yu-Mi Moon, Jong-Min Jeon, Yun-Gon Kim, Yung-Hun Yang.“Engineering of artificial microbial consortia of Ralstonia eutropha and Bacillus subtilis for poly(3-hydroxybutyrate-co-3-hydroxyvalerate) copolymer production from sugarcane sugar without precursor feeding” Bioresource Technology, 2018, 257: 92-101

106. Shashi Kant Bhatia, Ravi Kant Bhatia, Yong-Keun Choi, Eunsung Kan, Yun-Gon Kim & Yung-Hun Yang, “Biotechnological potential of microbial consortia and future perspectives.” Critical Reviews in Biotechnology, 2018, 1549-7801

105. Yoonhee Jin, Jin Kim, Jung Seung Lee, Sungjin Min, Suran Kim, Da-Hee Ahn, Yun-Gon Kim, and Seung-Woo Cho, “Vascularized Liver Organoids Generated Using Induced Hepatic Tissue and Dynamic Liver-Specific Microenvironment as a Drug Testing Platform” Advanced Functional Materials, 2018, 1-15

104. Yoonhee Jin, Jung Seung Lee, Jin Kim, Sungjin Min, Soohyun Wi, Ji Hea Yu, Gyeong-Eon Chang, Ann-Na Cho, Yeeun Choi, Da-Hee Ahn, Sung-Rae Cho, Eunji Cheong, Yun-Gon Kim, Hyong-Pyo Kim, Yonghwan Kim, Dong Seok Kim, Hyun Woo Kim, Zhejiu Quan, Hoon-Chul Kang, and Seung-Woo Cho “Three-dimensional brain-like microenvironments facilitate the direct reprogramming of fibroblasts into therapeutic neurons.” Nature Biomedical Engineering, 2018, 522:522-539

103. Hun-Suk Song, Hyung-Min Seo, Jong-Min Jeon, Yu-Mi Moon, Ju Won Hong, Yoon Gi Hong, Shashi Kant Bhatia, Jungoh Ahn, Hongweon Lee, Wooseong Kim, Yong-Cheol Park, Kwon-Young Choi, Yun-Gon Kim, Yung-Hun Yang “Enhanced isobutanol production from acetate by combinatorial overexpression of acetyl-CoA synthetase and anaplerotic enzymes in engineered Escherichia coli” Biotechnology and Bioengineering, 2018, 115:1971-1978

102. Won-Suk Song, Hae-Min Park, Jung Min Ha, Sung Gyu Shin, Han-Gyu Park, Joonwon Kim, Tianzi Zhang, Da-Hee Ahn, Sung-Min Kim, Yung-Hun Yang, Jae Hyun Jeong, Ashleigh B. Theberge, Byung-Gee Kim, Jong Kyun Lee & Yun-Gon Kim “Discovery of glycocholic acid and taurochenodeoxycholic acid as phenotypic biomarkers in cholangiocarcinoma” Scientific Reports, 2018, 8:11088

101. Yun-Gi Hong, Yu-Mi Moon, Tae-Rim Choi, Hye-Rim Jung, Soo-Yeon Yang, Jung-Oh Ahn. Jeong-Chan Joo, Kyungmoon Park, Yun-Gon Kim, Shashi Kant Bhatia, Yoo Kyung Lee, Yung-Hun Yang “Enhanced production of glutaric acid by NADH oxidase and GabD-reinforced bioconversion from L-lysine” Biotechnology and Bioengineering, 2018 116:333-341

100. Ranjit Gurava, Shashi Kant Bhatiaa, Yu-Mi Moon, Tae-Rim Choi, Hye-Rim Jung, Su-Yeon Yang, Hun-Suk Song, Jong-Min Jeon, Jeong-Jun Yoon, Yun-Gon Kim, Yung-Hun Yang “One-pot exploitation of chitin biomass for simultaneous production of electricity, N-acetylglucosamine and polyhydroxyalkanoates in microbial fuel cell using novel marine bacterium Arenibacter palladensis YHY2” Journal of Cleaner Production, 2018 209:324-332


2017

99. Won-Suk Song,Han-Gyu Park, Da-Hee Ann, Yoon-Yi Jeong, Mi-Young Koo, Yun-Gon Kim “QuantitativeAnalysis of Core-Fucosylated N-glycome according to Serum AFP Level for the Diagnosisof Hepatocellular Carcinoma” KoreanSociety for Biotechnology and Bioengineering Journal, 2017, 32:1-7

98. Pamidimarri D. V.N Sudheer, Yung-Hun Yang, Yun-Gon Kim, Kwon-Young Choi “Hydrolyticactivities of hydrolase enzymes from halophilic microorganisms” Biotechnology and bioprocess engineering,2017, 22:450-461

97. Jung-Ho Kim, Junyoung Kim, HyunJoong Kim, Ganesan Sathiyanarayanan,Shashi Kant Bhatia, HunSuk Song, YongKeun Choi, Yun-Gon Kim, KyungmoonPark, Yung-Hun Yang “Biotransformation of pyridoxal 5'-phosphate from pyridoxalby pyridoxal kinase (pdxY) to support cadaverine production in Escherichia coli” Enzyme and Microbial Technology,2017, 104:9-15

96. JongMin Jeon,HyunJoong Kim, Shashi Kant Bhatia, Ganesan Sathiyanarayanan, Junyoung Kim, JuWon Hong, Yoon Gi Hong, Kwon Young Choi, Yun-Gon Kim “Increase infurfural tolerance by combinatorial overexpression of NAD salvage pathwayenzymes in engineered isobutanol-producing E. coli” Bioresource Technology, 2017, 145:1430-1435

95. Hyung-Min Seo,Sathiyanarayanan Ganesan, Bhatia Shashi Kant, Song Hun-Suk, Junyoung Kim, Jong-MinJeon, Jeong-Jun Yoon, Yun-Gon Kim, Kyungmoon Park, Yung-Hun Yang “Developmentof a continuous L-lysine bioconversion system for cadaverine production” Journal of Industrial and EngineeringChemistry, 2017, 46:44-48

94. Junyoung Kim,HunSeok Song, HyunJoong Kim, JongMin Jeon, Ganesan Sathiyanarayanan, JeongJunYoon, Kyungmoon Park, Yun-Gon Kim, YungHun Yang “Microbial biodieselproduction from oil palm biomass hydrolysate using marine Rhodococcus sp. YHY01”Bioresource Technology, 2017,233:99-109

93. YoonWoo Kim,HanGyu Park, Cheol-Hwan Hwang, In Young Park, KwonYoung Choi, YungHun Yang,Young Hwan Kim, Yun-Gon Kim “A MALDI-MS-based quantitativeglycoprofiling method on a 96-well plate platform” Journal of Industrial and Engineering Chemistry, 2017,46:150-156

92. HanGyu Park,Cheol-Hwan Hwang, DaHee Ann, WonSuk Song, KwonYoung Choi, YungHun Yang,SangYoun Park, YunGon Kim “QUANTITATIVE TARGETED METABOLOMICS FOR15D-DEOXY-Δ12, 14-PGJ2 (15D-PGJ2) BY MALDI-MS” Biotechnology and Bioprocess Engineering,2017, 22:100-106

91. Han-Gyu Park, Ganesan Sathiyanarayanan,Cheol-Hwan Hwang, Da-Hee Ann, Jung-Ho Kim, Geul Bang, Kyoung-Soon Jang, HeeWook Ryu, Yoo Kyung Lee, Yung-Hun Yang, and Yun-Gon Kim “Chemical Structure of the Lipid A component ofPseudomonas sp. strain PAMC 28618 from Thawing Permafrost in Relation toPathogenicity” Scientific reports, 2017, 7:2168

90. Ganesan Sathiyanarayanan, Shashi KantBhatia, Hun-Suk Song, Jong-Min Jeon, Junyoung Kim, Yoo Kyung Lee, Yun-Gon Kim, Yung-Hun Yang “Productionand characterization of medium-chain-length polyhydroxyalkanoate copolymer fromArctic psychrotrophic bacterium Pseudomonas sp. PAMC 28620” International Journal of BiologicalMacromolecules, 2017,97: 710-720

89. Junyoung Kim, Hyung-Min Seo, Shashi KantBhatia, Hun-Seok Song, Jung-Ho Kim, Jong-Min Jeon, Kwon-Young Choi, WooseongKim, Jeong-Jun Yoon, Yun-Gon Kim andYung-Hun Yang “Production of itaconate by whole-cell bioconversion of citratemediated by expression of multiple cis-aconitate decarboxylase (cadA)genes in Escherichia coli” Scientific reports 2017 , 7: 39768

88. Hee-Jung Kim, Seyoung Jang, Joonwon Kim,Yung-Hun Yang, Yun-Gon Kim,Byung-Gee Kim, Kwon-Young Choi “Biosynthesis of indigo in Escherichia coliexpressing self-sufficient CYP102A from Streptomyces cattleya” Dyes andPigments 2017, 140: 29-35


2016

87. Cheol-Hwan Hwang, Han-Gyu Park, Yun-Gon Kim “Determination of Lipid A Profile of Gram-NegativeBacteria from Arctic Soils Using Mass Spectrometric Approaches” Korean Societyfor Biotechnology and Bioengineering2016, 12: 263-269

86. Jung-Ho Kim, Hyung-Min Seo, Ganesan Sathiyanarayanan, ShashiKant Bhatiaa, Hun-Suk Songa, Junyoung Kim, Jong-Min Jeon, Jeong-Jun Yoon, Yun-Gon Kim, Kyungmoon Park, Yung-HunYanga, “Development of a continuous l-lysine bioconversion system forcadaverine production” Journal of Industrial and Engineering Chemistry2016, 46: 44–48

85. HeeJin Kim, Yoon Na Cho, Sung Woo Cho, Yun-GonKim, Hee Wook Ryu, and Jae Hyun Jeong “Tuning the Hydrophobicity of AgarHydrogel with Substituent Effect” Polymer(Korea) 2016, 40: 321-327

84. GanesanSathiyanarayanan, Shashi Kant Bhatia, Hyun Joong Kim, Jung-Ho Kim,    Jong-Min Jeon, Yun-Gon Kim, Sung-Hee Park, Sang Hyun Lee, Yoo Kyung Leed and     Yung-Hun Yang “Metal removal and reductionpotential of an exopolysaccharide produced by Arctic psychrotrophic bacteriumPseudomonas sp. PAMC 28620” The Royal Society of Chemistry, 2016,6: 96870–96881

83. Kyoung-Jin Kim, Yoon-Woo Kim, Han-GyuPark, Cheol-Hwan Hwang, In Young Park, Kwon-Young Choi, Yung-Hun Yange, YoungHwan Kim, Yun-Gon Kim “AMALDI-MS-based quantitative glycoprofiling method on a 96-well plate platform” Journalof Industrial and Engineering Chemistry 2016, 46: 150-156

82. Cheol-hwan Hwang, Seong-geun Jeong, Han-kyuPark, Chang-soo Lee, Yun-gon Kim “Paper-BasedNeuraminidase Assay Sensor for Detection of Influenza Viruses” KoreanChemical Engineering Research2016, 54: 380-386

81. Kyoung-Jin Kim, Hee-Jin Kim,Han-Gyu Park,Cheol-Hwan Hwang, Changmin Sung, Kyoung-Soon Jang, Sung-Hee Park, Byung-GeeKim, Yoo-Kyung Lee, Yung-Hun Yang, Jae Hyun Jeong and Yun-Gon Kim “A MALDI-MS-based quantitative analytical method forendogenous estrone in human breast cancer cells” Scientific reports20166: 24489.

80. Da-Hye Yi, Ganesan Sathiyanarayanan, HyungMin Seo, Jung-Ho Kim, Shashi Kant Bhatia, Yun-GonKim, Sung-Hee Park, Ji-Young Jung, Yoo Kyung Lee, Yung-Hun Yang “Sensitivechange of iso-branched fatty acid (iso-15:0) in Bacillus pumilus PAMC23174 in response to environmental changes” Bioprocess and BiosystemsEngineering2016, 39: 159-167


2015

79. Yong Hyun Kim, Ganesan Sathiyanarayanan, Hyun Joong Kim ,Shashi Kant Bhatia , Hyung-Min Seo , Jung-Ho Kim , Hun-Seok Song , Yun-Gon Kim , Kyungmoon Park, andYung-Hun Yang “A Liquid-Based Colorimetric Assay of Lysine Decarboxylase andIts Application to Enzymatic Assay”Journal of Microbiology andBiotechnology2015, 25(12): 2110-2115

78. Ganesan Sathiyanarayanan, Da-Hye Yi, Shashi Kant Bhatia,Jung-Ho Kim, Hyung Min Seo, Yun-Gon Kim,Sung-Hee Park,c Daham Jeong, Seunho Jung, Ji-Young Jung, Yoo Kyung Lee andYung-Hun Yang “Exopolysaccharide from psychrotrophic Arctic glacier soilbacterium Flavobacterium sp. ASB 3-3 and its potential applications” The RoyalSociety of Chemistry,2015,5: 84492-84502

77. Shashi  K Bhatia, Da-Hye  Yi, Yong-Hyun Kim, Hyun-Joong  Kim, Hyung-Min  Seo, Ju-Hee  Lee, Jung-Ho Kim, Jong-Min  Jeon, Kyoung-Soon  Jang, Yun-Gon  Kim,Yung Hun Yang "Development of semi-synthetic microbial consortia ofStreptomyces coelicolor for increased production of biodiesel (fatty acidmethyl esters)"Fuel 2015,159: 189-196

76. Kyoung-Jin Kim, Hae-Min Park, Yoon-Woo Kim, Jang Mi Jin,Yung-Hun Yang, Jun Kyu Lee, Junho Chung, Sun-Gu Lee, Alan Saghatelian, YoungHwan Kim, Yun-Gon Kim "Stable isotopic labeling-based quantitativetargeted glycomics (i-QTaG)"Biotechnol Progress 2015,31:840-848

75. Kyoung-Jin Kim, Yoon-Woo Kim, Cheol-Hwan Hwang, Han-GyuPark, Yung-Hun Yang, Miyoung Koo, Yun-Gon Kim "A MALDI-MS-basedquantitative targeted glycomics (MALDI-QTaG) for total N-glycan analysis" Biotechnologyletters 2015, 37: 2019-2025

74. Da-Hye Yi, Sathiyanarayanan Ganesan, Hyung Min Seo, JuHee Lee, Hyun-Joong Kim, Yun-Gon Kim, Kyung-Soon Jang, Yoo Kyung Lee,Kyungmoon Park, Yung-Hun Yang. "Linear correlation of aliphatic diaminesto response factors by number of carbons in GC-MS" Journal ofIndustrial and Engineering Chemistry 2015, 30: 322-327

73. Hae-Min Park, Mintai Peter Hwang, Yoon-Woo Kim,Kyoung-Jin Kim, Young Hwan Kim, Yung-Hun Yang, Kwan Hyi Lee, Yun-Gon Kim"Mass spectrometry-based N-linked glycomic profiling as a means fortracking pancreatic cancer metastasis"  Carbohydrate Research 2015 413: 5-11

72. Yong Hyun Kim, Hyun joong Kim, Ji-Hyun Shin, Shashi KantBhatia, Hyung-Min Seo, Yun-Gon Kim, Yoo Kyung Lee, Yung-Hun Yang,Kyungmoon Park "Application of diethyl ethoxymethylenemalonate (DEEMM)derivatization for monitoring of lysine decarboxylase activity" Jounalof Molecular Catalysis B: Enzymatic  2015, 115: 151-154

71. Bo-Rahm Lee, Da-Hye Yi, Eunjung Song, Shashi Kant Bhatia,Ju Hee Lee, Yun-Gon Kim, Sung-Hee Park, Yoo Kyung Lee, Byung-Gee Kim,Yung-Hun Yang "Increased Vulnerability to Physical Stress by Inactivationof NdgR in Streptomyces coelicolor" Applied Biochemistry andBiotechnology  2015, 175: 3673-3682
 
70. Hyun-Joong Kim, Yong-Keun Choi, Hyeon Jin Jeon, ShashiKant Bhatia, Yong-Hyun Kim, Yun-Gon Kim, Kwon Young Choi, Hyung Joo Kim,Sang Hyun Lee, Yoo Kyung Lee, Yung-Hun Yang "Growth promotion of Chlorellavulgaris by modification of nitrogen source  composition with symbioticbacteria, Microbacterium sp. HJ1" Biomass and Bioenergy 2015, 74: 213-219

69. Yoon-Woo Kim, Kyoung-Jin Kim, Cheol-Hwan Hwang, Yun-GonKim "A solid-phase screening for identification of glycan-bindingcells" Biotechnology and Bioprocess Engineering 2015, 20:366-372

68. Yoon-Woo Kim, Changmin Sung, Seul Lee, Kyoung-JinKim, Yung-Hun Yang, Hee Wook Ryu, Yun-Gon Kim “MALDI-MS-based quantitative analysisfor ketone containing homoserine lactones in Pseudomonas aeruginosa” Analytical Chemistry2015, 87(2): 858-863

67. Kyoung-Soon Jang, Hae-Min Park, Yun-Gon Kim,Byung-Gee Kim, June-Hyung Kim “An on-line platform for the analysis of permethylatedoligosaccharides using capillary liquid chromatography-Electrosprayionization-tandem mass spectrometry” Journal ofNanoscience and Nanotechnology 2015, 15:3962-3966


2014

66. Yong Hyun Kim, Bu Soo Park, Shashi Kant Bhatia,Hyung-Min Seo, Jong-Min Jeon, Hyun-Joong Kim, Da-Hye Yi, Ju-Hee Lee, Kwon-youngChoi, Hyung-Yeon Park, Yun-Gon Kim, and Yung-Hun Yang “Production of rapamycin in streptomyceshygroscopicus from glycerol-based media optimized by systemic methodology”Journal of Microbiology and Biotechnology 2014, 24(10): 1319-1326

65. Sunmin Kim, Keon Young Kim, Jeong Kuk Park, Byung IlLee, Yun-Gon Kim and SangYoun Park  “Overproduction, crystallization and preliminary X-raycrystallographic analysis of Escherichia coli tRNA N-threonylcarbamoyladenosinedehydratase” Acta Crystallographica Section F 2014, F70: 1517-1520

64. Jungmi Kang, Hae-Min Park, Yoon-Woo Kim, Young hwan Kim,Shyni Varghese, hyunKwang Seok, Yun-Gon Kim, Sang-Heon Kim* “Control of mesenchymal stem cellphenotype and differentiation depending on cell adhesion mechanism” European Cells and Materials 2014,28: 387-403

63. Hae-Min Park, Yoon-Woo kim, kyoung-jin Kim, Young JuneKim, Yung-Hun Yang, Jang Mi Jin, Young Hwan Kim, Byung-Gee Kim, Hosup Shim, Yun-GonKim “Comparative N-linkedglycan analysis of wild-type and α1,3-galactosyltransferasegene knock-out pig fibroblasts using mass spectrometry approaches” Molecules and Cells 2014, 38(1):65-74

62. Hee-Jin Jeong, Hae-Min Park, Kyoung-Jin Kim,Yoon-Woo Kim, Shashi Kant Bhatia, Yoo Kyung Lee, Yung-Hun Yang, Byung-Gee Kim, Yun-GonKim "Highly sensitive glycosylation analysis of membrane glycoproteinsavoiding polymeric contaminants" Biotechnology and BioprocessEngineering 2014, 19: 545-550

61. Thangamani Rajesh, Jong-Min Jeon, Eunjung Song,Hae-Min Park, Hyung Min Seo, Hyun-Joong Kim, Da-Hye Yi, Yong-Hyun Kim,Kwon-Young Choi, Yun-Gon Kim, Hyung-Yeon Park, Yoo Kyung Lee, Yung-HunYang "Putative role of a Streptomyces coelicolor-derived α-mannosidase in deglycosylation andantibiotic production" Applied Biochemistry and Biotechnology2014, 172(3): 1639-51.

60. Jung Seung Lee, Jisoo Shin, Hae-Min Park, Yun-Gon Kim,Byung-Gee Kim, Jong-Won Oh, and Seung-Woo Cho* "Liver extracellular matrixproviding dual functions of two-dimensional substrate coating andthree-dimensional injectable hydrogel platform for liver tissueengineering" Biomacromolecules 2014, 15(1): 206-18



2013

59. Jong-min Jeon, Hee-Won Choi ,Guen-Chan Yoo ,Yong-Kuen Choi , Kwon-Young Choi, Hyung-Yeon Park, Sung-Hee Park ,Yun-GonKim, HyungJoo Kim, Sang Hyun Lee, Yoo Kyung Lee, Yung-Hun Yang, New mixturecomposition of organic solvents for efficient extraction of lipids fromChlorella vulgaris, Biomass and Bioenergy 2013, 59: 279-284

58. Hae-Min Park, Ju-Hyeong Park, Yoon-Woo Kim, Kyoung-JinKim, Hee-Jin Jeong, Kyoung-Soon Jang, Byung-Gee Kim* and Yun-Gon Kim* “The Xeno-glycomics database (XDB): arelational database of qualitative and quantitative pig glycome repertoire”Bioinformatics 2013, 29:2950-2952

57. Yun-Gon Kim, Anna Mari Lone, Alan Saghatelian “Analysis of the proteolysis ofbioactive peptides using a peptidomics approach” NatureProtocols 2013, 8:1730-1742

56. Hee-Jin Jeong, Mausumi Adhya, Hae-Min Park, Yun-GonKim*, Byung-Gee Kim* “Detectionof Hanganutziu-Deicher antigens in O-glycans from pig heart tissues bymatrix-assisted laser desorption/ionization time-of-flight mass spectrometry”Xenotransplantation2013, 20: 407-417

55. Thangamani Rajesh, Jong-Min Jeon, Yong-Hyun Kim,Hyun-Joong Kim, Da Hye Yi, Sung-Hee Park, Kwon-Young Choi, Yun-Gon Kim,Jaebum Kim, Seunho Jung, Hyung-Yeon Park, Yung-Hun Yang “Functional analysis of the gene SCO1782encoding Streptomyces hemolysin (S-hemolysin) in Streptomyces coelicolor M145”Toxicon 2013, 71:159-165

54. Heon-Ho Jeong, Ji-Hye Lee, Young-Moo Noh, Yun-Gon Kim,Chang-Soo Lee, “Generation of uniformagarose microwells for cell patterning by micromolding in capillaries” Macromolecular Research 2013, 21:534-540

53. Kyoung Soon Jang*, Yun-Gon Kim*, Adhya Mausumi,Hae-Min Park, Byung-Gee Kim, “The Sweets standing at the Borderline between Allo- andXenotransplantation” Xenotransplantation 2013, 20: 199-208 (*Joint first authors)

52. Eunjung Song, Rajesh Thangamani,Bo-Rham Lee Eun-jungKim, Jong-Min Jeon, Sung-Hee Park, Hyung-Yeon Park, Kwon-Young Choi, Yun-GonKim, Yung-hun Yang, Byung-Gee Kim, “Deletion of an architectural unit, leucyl aminopeptidase (SCO2179),in Streptomyces coelicolor increases actinorhodin production and sporulation”Applied Microbiology and Biotechnology 2013, 97: 6823-6833

51. Thangamani Rajesh, Hyung-Yeon Park, Eunjung Song,Changmin Sung, Sung-Hee Park, Jae-Hun Lee, Dongwon Yoo, Yun-Gon Kim,Jong-Min Jeon, Byung-Gee Kim, Yung-Hun Yang “A new flow path design for multidimensional protein identificationtechnology using nano-liquid chromatography electrospray ionization massspectrometry” Korean Journal of ChemicalEngineering 2013, 30: 417-421

50. Hae-Min Park, Yung-Hun Yang, Byung-Gee Kim, Yun-GonKim, “Structuralcharacterization of α-galactosylated O-glycans fromminiature pig kidney and endothelial cells” CarbohydrateResearch 2013, 369: 48-53

49. Anna Mari Lone, Yun-Gon Kim, Alan Saghatelian, “Peptidomics methods for theidentification of peptidase–substrate interactions”Current Opinion in Chemical Biology 2013, 17: 83-89



2012

48. Hee-Jin Jeong*, Yun-Gon Kim*, Yung-Hun Yang andByung-Gee Kim “High-throughput d oftotal N-glycans by matrix-assisted laser desorption/ionization time-of-flightmass spectrometry” Analytical Chemistry 2012, 4:3453-3460 (*Joint first authors)

47. Yun-Gon Kim, Anna Mari Lone, Whitney Nolte, AlanSaghatelian “A Peptidomics Approachto Elucidate the Proteolytic Regulation of Bioactive Peptides” Proceedings of the National Academy of Sciences of the United Statesof America (PNAS) 2012, 109:8523-8527

46. Heon Ho Jeong*, Yun-Gon Kim*, Sung-Chan Jang,Hyunmin Yi and Chang-Soo Lee “Profiling surface glycans on live cells and tissues using quantumdot-lectin nanoconjugates” Lab on a Chip 2012, 12: 3290-3295 (*Joint first authors)

45. Yung-Hun Yang, Eunjung Song, Ji-Nu Kim, Bo-Rahm Lee,Eun-Jung Kim, Sung-Hee Park, Woo-Seong Kim, Hyung-Yeon Park, Jong-Min Jeon,Thangamani Rajesh, Yun-Gon Kim, Byung-Gee Kim “Characterization of a new ScbR-like γ-butyrolactone binding regulator (SlbR) in Streptomyces coelicolor”Applied Microbiology and Biotechnology 2012, 96: 113-121

44. Rajesh, Thangamani1, Eunjung Song, Bo-Rahm Lee, Sung-HeePark, Jong-Min Jeon1, Eunjung Kim, Changmin Sung, Jae-Hun Lee, Dongwon Yoo,Hyung-Yeon Park, Yun-Gon Kim, Byung-Gee Kim, and Yung-Hun Yang “Increased Sensitivity toChloramphenicol by Inactivation of manB in Streptomyces coelicolor” Journal of Microbiology and Biotechnology 2012, 22: 1324–1329.

43. Yun-Gon Kim, Alan Saghatelian “Functional Analysis of Protein Targetsby Metabolomic Approaches” Topics in CurrentChemistry 2012, 324: 137-162

42. Thangamani Rajesh, Eunjung Song, Ji-Nu Kim, Bo-Rahm Lee,Eun-Jung Kim Sung-Hee Park, Yun-Gon Kim, Dongwon Yoo, Hyung-Yeon Park,Yun-Hui Choi, Byung-Gee Kim, Yung-Hun Yang “Inactivation of phosphomannose isomerase gene abolishes sporulationand antibiotic production in Streptomyces coelicolor” Applied Microbiology and Biotechnology 2012, 93: 1685-1693

41. Liliana Guzman-Rojas, Roberto Rangel, Ahmad Salameh,Julianna K. Edwards, Eleonora Dondossol, Yun-Gon Kim, Alan Saghatelian,Ricardo J. Giordanoa, Mikhail G. Kolonin, Fernanda I. Staquicini, ErkkiKoivunen, Richard L. Sidmane, Wadih Arap and Renata Pasqualini “Cooperative effects of aminopeptidase N(CD13) expressed by nonmalignant and cancer cells within the tumormicroenvironment” Proceedings of the NationalAcademy of Sciences of the United States of America (PNAS) 2012, 109: 1637-1642

40. Yun-Gon Kim, Hyung-Yeon Park, Dongwon Yoo,Changmin Sung, Eunjung Song, Jae-Hun Lee, Yun-Hui Choi, Yong-Hyun Kim,Chang-Soo Lee, Kyung-Moon Park, Byung-Gee Kim, Yung-Hun Yang “Selective derivatization of nucleotidediphosphate (NDP)-4-keto sugars for electrospray ionization-mass spectrometry(ESI-MS)” Journal of Chromatography B 2012, 893-894:177-181



2011

39. Yun-Gon Kim, Angela C. Lou and Alan Saghatelian “A metabolomics strategy for detectingprotein-metabolite interactions to identify natural nuclear receptor ligands”Molecular Biosystems2011, 7: 1046-1049

38. Edwin A. Homan*, Yun-Gon Kim*, James P. Cardia,and Alan Saghatelian “Monoalkylglycerolether lipids promote adipogenesis” Journal of theAmerican Chemical Society 2011, 113: 5178-5181(*Joint first authors)

37. Arthur D. Tinoco*, Yun-Gon Kim*, Debarati M.Tagore, Jessica Wiwczar, William S. Lane, Nika N. Danial, Alan Saghatelian “A peptidomics strategy to elucidate theproteolytic pathways that inactivate peptide hormones” Biochemistry 2011, 50:2213-2222(*Joint first authors)

36. Sangjun Moon, Yun-Gon Kim, Lingsheng Dong, MichaelLombardi, Edward Haeggstrom, Roderick V. Jensen, Li-Li Hsiao, Utkan Demirci “Drop-on-demand single cell isolationand total RNA analysis” PLoS One 2011, 6: e17455.

35. Eun-Mi Kim, Jaehi Kim, Yun-Gon Kim, Peter Lee,Dong-Sik Shin, Mira Kim, Ji-Sook Hahn, Yoon-Sik Lee, Byung-Gee Kim “Development of high-throughputphosphorylation profiling method for identification of Ser/Thr kinasespecificity”Journal of Peptide Science 2011, 17: 392-397



2010

34. Keun Pil Kim*, Yun-Gon Kim*, Chang-Hyung Choi,Hye-Eun Kim, Sang-Ho Lee, Woo-Suk Chang, Chang-Soo Lee “In situ monitoring of antibioticsusceptibility of bacterial biofilms in a microfluidic device” Lab on a Chip 2010, 10: 3296-3299 (*Joint first authors)

33. Yun-Gon Kim, Yung-Hun Yang, Byung-Gee Kim “High-throughput characterization oflipopolysaccharide-binding proteins using mass spectrometry” Journal of Chromatography B 2010,878: 3323-3326

32. Won Gu Lee*, Yun-Gon Kim*, Bong Geun Chung, UtkanDemirci, Ali Khademhosseini “Nano/microfluidics for diagnosis of infectious diseases indeveloping countries” Advanced Drug DeliveryReviews 2010, 62: 449-457(*Joint first authors)

31. Heon-Ho Jeong, Sang-Ho Lee, Jong-Min Kim, Hye-Eun Kim, Yun-GonKim, Jung Yul Yoo, Woo-Suk Chang, Chang-Soo Lee “Microfluidic monitoring of Pseudomonasaeruginosa chemotaxis under the continuous chemical gradient” Biosensors & Bioelectronics2010, 26, 351-356

30. Yung-Hun Yang, Eunjung Song, Bo-Rahm Lee, Eun-jung Kim,Sung-Hee Park, Yun-Gon Kim, Chang-Soo Lee, Byung-Gee Kim “Rapid functional screening ofregulators in Streptomyces coelicolor by pH indicator and application to theMarR-like regulator AbsC” Applied andEnvironmental Microbiology 2010, 76: 3645-3656

29. Yung-Hun Yang, Eunjung Song, Sung-Hee Park, Ji-Nu Kim,Kwangwon Lee, Eunjung Kim, Yun-Gon Kim, Byung-Gee Kim "Loss ofphosphomannomutase activity enhances actinorhodin production in Streptomycescoelicolor" Applied Microbiology and Biotechnology 2010, 86:1485-1492

28. Chang-Hyung Choi, Ji-Hye Lee, Taek-Sung Hwang, Chang-SooLee, Yun-Gon Kim, Yung-Hun Yang, Kang Moo Huh “Preparation of bacteria microarrayusing selective patterning of polyelectrolyte multilayer and poly(ethyleneglycol)-poly(lactide) diblock copolymer” MacromolecularResearch 2010, 18: 254-259



2009

27. Yun-Gon Kim, Sangjun Moon, Daniel Kuritzkes,Utkan Demirci“Quantum dot-based HIVcapture and imaging in microfluidic channel” Biosensors& Bioelectronics 2009, 25: 253-258

26. Yun-Gon Kim, Hee-Jin Jeong, Kyoung-Soon Jang,Yung-Hun Yang, Yong-Sang Song, Junho Chung, Byung-Gee Kim “Rapid and high-throughput analysis ofN-glycans from ovarian cancer serum using 96-well plate platform” Analytical Biochemistry 2009, 391:151-153

25. Yun-Gon Kim, David J. Harvey, Yung-Hun Yang,Chung-Gyu Park, Byung-Gee Kim“Mass spectrometric analysis of the glycosphingolipid-derived glycansfrom miniature pig endothelial cells and islets: direct identification of a-Galepitope in pig islets” Journal of MassSpectrometry 2009,44: 1489-1499

24. Yun-Gon Kim, Geun-Cheol Gil, Kyoung-Soon Jang,Sukmook Lee, Hyoung-Il Kim, Jung-Sik Kim, Junho Chung, Chung-Gyu Park, David J.Harvey, Byung-Gee Kim“Qualitativeand quantitative comparison of N-glycans between pig endothelial and isletcells by high-performance liquid chromatography and mass spectrometry basedstrategy” Journal of Mass Spectrometry 2009, 44:1087-1104

23. Yun-Gon Kim, Joo Youn Oh, Geun-Cheol Gil, Mee KumKim, Jung Hwa Ko, Sukmook Lee, Hyun Ju Lee, Won Ryang Wee, Byung-Gee Kim “Identification of a-Gal and non-Galepitopes in pig corneal endothelial cells and keratocytes by using massspectrometry” Current Eye Research 2009, 34: 877-895

22. Kyoung-Soon Jang, Yun-Gon Kim, Geun-Cheol Gil,Sang-Ho Park, Byung-Gee Kim “Mass spectrometric quantification of neutral and sialylatedN-glycans from a recombinant therapeutic glycoprotein produced in the two CHOcell lines” Analytical Biochemistry 2009, 386: 228-236

21. Yung-Hun Yang, Kwangwon Lee, Kyoung-Soon Jang, Yun-GonKim, Sung-Hee Park, Chang-Soo Lee, Byung-Gee Kim “Low mass cut-off evasion with qz valueoptimization in ion trap” Analytical Biochemistry 2009, 387: 133-135

20. Yung-Hun Yang, Tae-Wan Kim, Sung-Hee Park, Kwangwon Lee,Hyung-yeon Park, Eunjung Song, Hwang-Soo Joo, Yun-Gon Kim, Ji-Sook Hahn,Byung-Gee Kim “Cell-free E. colibased system to screen quorum sensing molecules interacting with quorumreceptor proteins of Streptomyces coelicolor” Appliedand Environmental Microbiology 2009, 75:6367-6372



2008

19. Yun-Gon Kim, Geun-Cheol Gil, David J. Harvey,Byung-Gee Kim“Structural analysis ofalpha-Gal and new non-Gal carbohydrate epitopes from specific pathogen-freeminiature pig kidney” PROTEOMICS 2008, 8: 2596-2610

18. Yun-Gon Kim, Dong-Sik Shin, Yung-Hun Yang,Geun-Cheol Gil, Chung-Gyu Park, Yusuke Mimura, David K C Cooper, Pauline MRudd, Raymond A Dwek, Yoon-Sik Lee, Byung-Gee Kim “High-throughput screening of glycanbinding proteins using miniature pig kidney N-glycan-immobilized beads” Chemistry & Biology 2008, 15:215-223

17. Geun-Cheol Gil, Yun-Gon Kim, Byung-Gee Kim “A relative and absolute quantificationof neutral N-linked oligosaccharides using modification with carboxymethyltrimethylammonium hydrazide and MALDI-TOF MS” AnalyticalBiochemistry 2008, 379: 45-59

16. Louise Royle, Matthew P. Campbell, Catherine M.Radcliffe, Dawn M. White, David J. Harvey, Jodie L. Abrahams, Yun-Gon Kim,George W. Henry, Nancy A. Shadick, Michael E. Weinblatt, David M. Lee, PaulineM. Rudd, Raymond A. Dwek “HPLC-basedanalysis of serum N-glycans on a 96-well plate platform with dedicated databasesoftware” Analytical Biochemistry 2008, 376: 1-12

15. Kyoung-Soon Jang, Woo-Jae Chung, Hyun-Ki Kim, Yun-GonKim, Yoon-Sik Lee, and Byung-Gee Kim "Selective Removal of Anti- a-GalAntibodies from Human Serum by Using Synthetic a -Gal Epitope on a Core-shellType Resin" Biotechnology and Bioprocess Engineering 2008,13: 445-452

14. June-Hyung Kim, Kyoung-Soon Jang, Yung-Hun Yang, Yun-GonKim, Ji-Hye Lee, Min-Kyu Oh, Byung-Gee Kim, Chang-Soo Lee “Rapid functional identification ofputative genes based on the combined in vitro protein synthesis with massspectrometry: A tool for functional genomics” AnalyticalBiochemistry 2008, 375: 11-17

13. Dong-Sik Shin, Yun-Gon Kim, Eun-Mi Kim, Mira Kim,Hyung-Yeon Park, June-Hyung Kim, Bon-Su Lee, Byung-Gee Kim, Yoon-Sik Lee “Solid-Phase Peptide Library Synthesison HiCore Resin for Screening Substrate Specificity of Brk Protein TyrosineKinase” Journal of Combinatorial Chemistry 2008, 14: 20-23



2007

12. Yun-Gon Kim, Kyoung-Soon Jang, Hwang-Soo Joo,Hyun-Ki Kim, Chang-Soo Lee, Byung-Gee Kim“Simultaneous profiling of N-glycans and proteins from human serumusing a parallel-column system directly coupled to mass spectrometry” Journal of Chromatography B 2007,1: 109-119

11. Yun-Gon Kim, Dong-Sik Shin, Eun-Mi Kim,Hyung-Yeon Park, Chang-Soo Lee, June-Hyung Kim, Bon-Su Lee, Yoon-Sik Lee,Byung-Gee Kim“High-throughputidentification of substrate specificity for protein kinase by using an improvedone-bead-one-compound library approach” AngewandteChemie International Edition 2007, 46:5408-5411

10. Hwang-Soo Joo, Yun-Gon Kim, Kyoung-Soon Jang,Byung-Gee Kim “Tandem MassSpectrometry of N-linked Glycans from Human Immunoglobulin G” Korean Journal of Biotechnology and Bioengineering 2007, 22: 241-245

 9. Chang-Soo Lee, Sang-Ho Lee, Yun-Gon Kim, Ji-HyeLee, Yong-Kweon Kim, Byung-Gee Kim “A method of binding kinetics of a ligand to micropatterned proteinson a microfluidic chip” Biosensors &Bioelectronics 2007, 15: 891-898

 8. Chang-Soo Lee, Kyoung-Ku Kang, June-Hyung Kim, Yun-GonKim, Hyun-Woo Shim, Taek-Sung Hwang, Hyun-Ku Rhee, Byung-Gee Kim “Analysis of small molecules bydesorption/ionization on mesoporous silicate (DIOM)-mass spectrometry (MS)”Microporous and Mesoporous Materials 2007, 98: 200-207



2006

7. Yun-Gon Kim, Sun-Young Kim, Young-Mi Hur,Hwang-Soo Joo, Junho Chung, Dong-Sup Lee, Louise Royle, Pauline M. Rudd,Raymond A. Dwek, David J. Harvey, Byung-Gee Kim“The identification and characterization of xenoantigenicnonhuman carbohydrate sequences in membrane proteins from porcine kidney”PROTEOMICS 2006, 6: 1133-1142

6. Yun-Gon Kim, Chang-Soo Lee, Woo-Jae Chung, Eun-MiKim, Dong-Sik Shin, June-Hyung Kim, Yoon-Sik Lee, Junho Chung, Byung-Gee Kim “Selection of peptides forlipopolysaccharide binding on to epoxy beads and selective detection ofGram-negative bacteria” Biotechnology Letters 2006, 28: 79-84

5. Chang-Soo Lee, Sang-Ho Lee, Yun-Gon Kim,Chang-Hyung Choi, Yong-Kweon Kim, Byung-Gee Kim “Biochemical reactions on a microfluidic chip based on aprecise fluidic handling method at the nanoliter scale” Biotechnology and Bioprocess Engineering 2006, 11: 146-153

4. Chang-Soo Lee, Sang-Ho Lee, Yun-Gon Kim, Min-KyuOh, Taek-Sung Hwang, Young-Woo Lee, Hwan-Moon Song, Bo-Yeol Kim, Yong-KweonKim, Byung-Gee Kim “Fabricationof disposable protein chip for simultaneous sample detection” Biotechnology and Bioprocess Engineering 2006, 11: 455-461



2005

3. Yun-Gon Kim, Chang-Soo Lee, Woo-Jae Chung, Eun-miKim, Dong-Sik Shin, Jung-Hyo Rhim, Yoon-Sik Lee, Byung-Gee Kim, Junho Chung “Screening of LPS-specific peptides froma phage display library using epoxy beads” Biochemicaland Biophysical Research Communications 2005,329: 312-317


2004

2. Chang-Soo Lee, Yun-Gon Kim, Hwang-Soo Joo,Byung-Gee Kim “Structural analysis oflipid A from Escherichia coli O157:H7:K- using thin-layer chromatography andion-trap mass spectrometry” Journal of MassSpectrometry 2004, 39: 514-25

1. Chang-Soo Lee, Yun-Gon Kim, Eun-Mi Kim, Byung-GeeKim “Derivatization ofalpha-ketoacid for the analysis of aminotransferase reaction using massspectrometry” Korean Journal of Biotechnology andBioengineering 2004, 19: 394-398


저서(편저)